Key Responsibilities:

 

1. Model Development and Improvement:

• Conduct research on protein de novo prediction and protein design/engineering models, with an emphasis on the development of novel de novo prediction or diffusion-based protein design models or the enhancement of existing open-source models such as OpenFold and Genie.
• Develop and implement algorithms to improve the accuracy and efficiency of protein structure predictions and protein design, including finding novel routes to score predictions to guide selection for experimental research.
• Collaborate with cross-functional teams to integrate model improvements into PUXANO’s experimental validation platform, including CryoEM image processing workflows.
• The development and evaluation of structure-to-function prediction algorithms.

 

2. Research and Innovation:

• Stay abreast of the latest scientific literature and advancements in protein prediction, protein design and engineering, structure-to-function prediction.
• Propose and lead innovative ML/DL research projects within PUXANO and in collaboration with external teams aimed at advancing PUXANO’s Gene-to-Structure or Design-to-Structure capabilities and offerings.

 

3. Collaboration and Communication:

• Work collaboratively with internal and external stakeholders, including Pharma and Biotech partners.
• Communicate complex technical concepts effectively to both technical and non-technical audiences.
• Contribute to grant writing and funding proposals to support ongoing research initiatives.

 

Qualifications:

• Ph.D. in Computer Science, Physics, Computational Biology, Bioinformatics, Structural Biology, or a related field.
• Strong background in machine learning and deep learning techniques, if possible in the context of protein science.
• Experience in using HPC resources and training models on GPU clusters (e.g. EuroHPC).
• Proficiency in programming languages such as Python, and deep learning frameworks like Tensorflow, Pytorch, and other related tools.
• Excellent problem-solving skills and a track record of innovative research.
• Strong communication skills and the ability to work collaboratively in a fast-paced, interdisciplinary environment.

 

Preferred Qualifications:

• Familiarity with cryo-electron microscopy (cryoEM).
• Knowledge of structural bioinformatics and molecular dynamics simulations.
• Previous experience in the Pharma or Biotech industry.

 

How to Apply:

Interested candidates should submit a resume, including a GitHub link showcasing computational work, a cover letter, and contact information for three references (including technical references for questions) to careers@puxano.com. Candidates without demonstrable expertise in ML/DL through GitHub or contributions to ML/DL scientific papers will not be considered.

PUXANO is an equal opportunity employer. We celebrate diversity and are committed to creating an inclusive environment for all employees.

Application Deadline: February 15 2026

Join PUXANO and be a part of a pioneering team that’s shaping the future of protein design and structure-based protein research!